Google releases Samba client for Android, adds Windows file shares to the DownloadsFiles app.If youre not familiar with it, Samba is an open source implementation of the SMBCIFS networking protocol.It allows many Unix based operating systems to connect to Windows file shares and printers, making it easy to transfer files over a network between operating systems.Out of nowhere, Google has released a Samba client for Android.The app is pretty barebones, but it gets the job done.Just enter the file share you want to connect to, plus a username and password if required.Once you tap Mount, the share should instantly appear in the DownloadsFiles app, allowing you to easily copy files back and forth.Opening files from the share works too I was able to play a video file straight from my home server granted, it was a low resolution WMV file.The application is also open source, and you can find the code for it on Git.Hub. If youre looking for a more powerful file manager with Samba support, I recommend Solid File Explorer, but this app is great for basic operations.Google should really bake this into the Files app on Android O.Dump Windows Sam File' title='Dump Windows Sam File' />One of our Windows 2003 servers that has WSUS is full on hdd space.Doing a search for files I find this SQLDump10000.I have done some.WiseFixer uses a highperformance detection algorithm that will quickly identify missing and invalid references in your Windows registry.With a few easy steps.Quickcheck. samtools quickcheck options in.Quickly check that input files appear to be intact.Checks that beginning of the file contains.Dump Windows Sam File' title='Dump Windows Sam File' />ID fish r LB 1.SM alpha o output.Samtools is a set of utilities that manipulate alignments in the BAM. Age Of War Hacked School Unblocked Game . It imports from and exports to the SAM Sequence AlignmentMap.Samtools is designed to work on a stream.It regards an input file.Several commands can thus be combined with Unix.Samtools always output warning and error messages to the standard.Samtools is also able to open a BAM not SAM file on a remote FTP or.HTTP server if the BAM file name starts with ftp or http.Samtools checks the current working directory for the index file and.Samtools does not retrieve the.With no options or regions specified, prints all alignments in the specified.SAM, BAM, or CRAM format to standard output.SAM format with no header.You may specify one or more space separated region specifications after the.Use of region specifications requires a coordinate sorted.BAM or CRAM format.SAM, and the. options set the output file names.One of these two options is required.SAM input does not contain SQ headers, and the.CRAM output. options filter the alignments that will be included in the output to only those.Regions can be specified as RNAME STARTPOS ENDPOS and all position.Important note when multiple regions are given, some alignments may be output.Examples of region specifications.Output all alignments mapped to the reference sequence named chr.SQ SN chr. 1. The region on chr.The 1. 00. 1bp region on chr.Output the unmapped reads at the end of the file.This does not include any unmapped reads placed on a reference sequence.Output all alignments.Mostly unnecessary as not specifying a region at all has the same effect.Output in the BAM format.Output in the CRAM format requires T.Enable fast BAM compression implies b.Output uncompressed BAM.This option saves time spent on.Include the header in the output.Output the header only.Instead of printing the alignments, only count them and print the.All filter options, such as.Output long help and exit immediately.FILE stdout. U FILE.Write alignments that are.When this option is used, all alignments or all alignments intersecting the.A tab delimited. Each line must contain the reference name in the first column and the length of.Any additional fields beyond the second column are ignored.This file also. defines the order of the reference sequences in sorting.If you run. samtools faidx lt ref.A FASTA format reference.If an index is not present, one will be generated for you.Only output alignments overlapping the input BED.Only output alignments in read group.Output alignments in read groups listed in.Skip alignments with MAPQ smaller than.Only output alignments in library.Only output alignments with number of CIGAR bases consuming query.Only output alignments with all bits set in.FLAG field. can be specified in hex by beginning with 0x i.A F. or in octal by beginning with 0 i.Do not output alignments with any bits set in.FLAG field. can be specified in hex by beginning with 0x i.A F. or in octal by beginning with 0 i.Do not output alignments with all bits set in.FLAG field. This is the opposite of f such.G1. 2 is the same as no filtering at all.A F. or in octal by beginning with 0 i.Read tag to exclude from output repeatable null.Collapse the backward CIGAR operation.Output only a proportion of the input alignments.This subsampling acts in the same way on all of the alignment records in.The integer and fractional parts of the.When subsampling data that has previously been subsampled, be sure to use.Number of BAM compression threads to use in addition to main thread 0.Ignored for compatibility with previous samtools versions.Previously this option was required if input was in SAM format, but now the.Sort alignments by leftmost coordinates, or by read name when.The sorted output is written to standard output by default, or to the.This command will also create temporary files.Set the desired compression level for the final output file, ranging from 0.Approximately the maximum required memory per thread, specified either in bytes.To prevent sort from creating a huge number of temporary files, it enforces a.M for this setting.Sort by read names i.Sort first by the value in the alignment tag TAG, then by position or name if.Write the final sorted output to.Write the final output as.By default, samtools tries to select a format based on the.Write temporary files to.PREFIX. nnnn. bam.PREFIXsamtools. mmm.By default, any temporary files are written alongside the output file, as.INT. Set number of sorting and compression threads.By default, operation is single threaded.The following rules are used for ordering records.If option t is in use, records are first sorted by the value of.For example, t RG will make read group the primary sort key.The. rules for ordering by tag are.Records that do not have the tag are sorted before ones that do.If the types of the tags are different, they will be sorted so.A come before array tags type B, then.H and Z, then numeric tags types f and i.Numeric tags types f and i are compared by value.Note that comparisons.String tags types H and Z are compared based on the binary.C. Character tags type A are compared by binary character value.No attempt is made to compare tags of other types notably type B.When the n option is present, records are sorted by name.Names are. compared so as to give a natural ordering i.This means a. 1 will.Records with the same name will be ordered according to the values of.READ1 and READ2 flags see.When the n option is.SQ. header records, then by position in the reference, and then by the REVERSE.This has now been removed.The previous out.TPREFIX. and o. FILE.The previous o option should be removed.Index a coordinate sorted BAM or CRAM file for fast random access.Note that this does not work with SAM files even if they are bg This index is needed when.If an output filename is given, the index file will be written to.Otherwise, for a CRAM file.BAM file. will be created, depending on the index format selected.Create a BAI index.This is currently the default when no format options are used.Create a CSI index.By default, the minimum interval size for the index is 21.BAI format. Create a CSI index, with a minimum interval size of 2INT.Retrieve and print stats in the index file corresponding to the input file.Before calling idxstats, the input BAM file must be indexed by samtools index.The output is TAB delimited with each line consisting of reference sequence.It is written to.Does a full pass through the input file to calculate and print statistics.Provides counts for each of 1.FLAG field. Each category in the output is broken down into QC pass and.QC fail, which is presented as PASS FAIL followed by a description of.The first row of output gives the total number of reads that are QC pass and.For example. 1. 22 2.QC passed reads QC failed reads.Which would indicate that there are a total of 1.QC pass and 2. 8 of which are marked as not passing.Following this, additional categories are given for reads which are.And finally, two rows are given that additionally filter on the reference.RNAME, mate reference name MRNM, and mapping quality MAPQ fields.MRNM not equal to RNAME.Q 5. 0x. 1 bit set and neither 0x.MRNM not equal to RNAME and MAPQ 5.BAM files and outputs in a text format.The output can be visualized graphically using plot bamstats.Options c, coverage MIN,MAX,STEP.Set coverage distribution to the specified range MIN, MAX, STEP all given as integers.Exclude from statistics reads marked as duplicates.STRINT. Required flag, 0 for unset.See also samtools flags.F, filtering flag STRINT.Filtering flag, 0 for unset.See also samtools flags.GC depth FLOAT. the size of GC depth bins decreasing bin size increases memory requirement.This help message.INT. Maximum insert size.Include only listed read group or sample name.INT. Include in the statistics only reads with the given read length.FLOAT. Report only the main part of inserts.P, split prefix STR.A path or string prefix to prepend to filenames output when creating.INT. The BWA trimming parameter.FILE. Reference sequence required for GC depth and mismatches per cycle calculation.S, split TAG. In addition to the complete statistics, also output categorised statistics.Categorised statistics are written to files named.
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